Sudipto ROY

Cilia and Ciliopathies
PhD – National Centre for Biological Sciences, Bangalore, India
Email: sudipto@imcb.a-star.edu.sg
SUMMARY
Sudipto Roy is a Senior Principal Investigator at at the Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR). He is also an Adjunct Associate Professor with the Department of Paediatrics of the National University of Singapore.
Sudipto was trained as a developmental geneticist during his graduate studies, working on muscle and neuronal development with the fruit fly, Drosophila melanogaster. During his postdoctoral work at University of Sheffield, UK, he pivoted to vertebrate development, using the zebrafish as a model to understand mechanisms of Hedgehog signaling, and how this pathway regulates skeletal muscle development.
Sudipto’s lab at the IMCB investigates the biology of cilia and flagella and the wide spectrum of human disorders that arise from dysfunction of these organelles. He uses genetic and cellular biological analyses with zebrafish and mouse models, as well as human embryonic stem cell-derived organoids and tissues, to tackle these questions. His lab has made seminal contributions towards our understanding of the transcriptional regulation of ciliary biogenesis and how mutations in genes encoding ciliary components cause diseases like polycystic kidney disease, brain developmental defects, congenital heart malformations and infertility. The current focus of the lab includes the study of the regulatory pathway that directs that differentiation of multiciliated cells, the role of cilia in cerebrospinal fluid flow and spine morphogenesis, the ciliary regulation of stem cell activity, neural development and neuronal signaling, cilia in sense organs and therapeutics for ciliary disorders.
AWARDS & GRANTS
KEY AWARDS
- 2023: A*STAR Graduate Academy – STAR Mentor Award
- 2002: Young Scientist Medal from Indian National Science Academy
- 1998: Wellcome Trust International Postdoctoral Research Fellowship
KEY GRANTS
- 2023: National Medical Research Council – Individual Research Grant (NMRC-IRG)
- 2020: National Medical Research Council – Individual Research Grant (NMRC-IRG)
- 2019: National Research Foundation of Singapore - Israel Science Foundation (NRF-ISF) Grant
RESEARCH
- Regulatory pathways during the differentiation of multiciliated cells
- Role of cilia in cerebrospinal fluid flow and spine morphogenesis
- Ciliary regulation of left-right asymmetry
- Primary cilia signaling in adult stem cells, neural development and neural circuits
- Therapeutics for ciliary disorders
PUBLICATIONS
- Control of meiotic chromosomal bouquet and germ cell morphogenesis by the zygotene cilium.
Mytlis A, Kumar V, Qiu T, Deis R, Hart N, Levy K, Masek M, Shawahny A, Ahmad A, Eitan H, Nather F, Adar-Levor S, Birnbaum RY, Elia N, Bachmann-Gagescu R, Roy S, Elkouby YM.
Science. 2022 Jun 17;376(6599):eabh3104. doi: 10.1126/science.abh3104. Epub 2022 Jun 17. PMID: 35549308 - De novo identification of mammalian ciliary motility proteins using cryo-EM.
Gui M, Farley H, Anujan P, Anderson JR, Maxwell DW, Whitchurch JB, Botsch JJ, Qiu T, Meleppattu S, Singh SK, Zhang Q, Thompson J, Lucas JS, Bingle CD, Norris DP, Roy S, Brown A.
Cell. 2021 Nov 11;184(23):5791-5806.e19. doi: 10.1016/j.cell.2021.10.007. Epub 2021 Oct 28. PMID: 34715025; PMCID: PMC8595878 - Diversity and function of motile ciliated cell types within ependymal lineages of the zebrafish brain.
D'Gama PP, Qiu T, Cosacak MI, Rayamajhi D, Konac A, Hansen JN, Ringers C, Acuña-Hinrichsen F, Hui SP, Olstad EW, Chong YL, Lim CKA, Gupta A, Ng CP, Nilges BS, Kashikar ND, Wachten D, Liebl D, Kikuchi K, Kizil C, Yaksi E, Roy S, Jurisch-Yaksi N.
Cell Reports. 2021 Oct 5;37(1):109775. doi: 10.1016/j.celrep.2021.109775. PMID: 34610312; PMCID: PMC8524669 - Mutations in DZIP1L, which encodes a ciliary-transition-zone protein, cause autosomal recessive polycystic kidney disease.
Lu H, Galeano MCR, Ott E, Kaeslin G, Kausalya PJ, Kramer C, Ortiz-Brüchle N, Hilger N, Metzis V, Hiersche M, Tay SY, Tunningley R, Vij S, Courtney AD, Whittle B, Wühl E, Vester U, Hartleben B, Neuber S, Frank V, Little MH, Epting D, Papathanasiou P, Perkins AC, Wright GD, Hunziker W, Gee HY, Otto EA, Zerres K, Hildebrandt F, Roy S, Wicking C, Bergmann C.
Nature Genetics. 2017 Jul;49(7):1025-1034. doi: 10.1038/ng.3871. Epub 2017 May 22. PMID: 28530676; PMCID: PMC5687889 - Gmnc Is a Master Regulator of the Multiciliated Cell Differentiation Program.
Zhou F, Narasimhan V, Shboul M, Chong YL, Reversade B, Roy S.
Current Biology. 2015 Dec 21;25(24):3267-73. doi: 10.1016/j.cub.2015.10.062. PMID: 26778655
- Foxj1 transcription factors are master regulators of the motile ciliogenic program.
Yu X, Ng CP, Habacher H, Roy S.
Nature Genetics. 2008 Dec;40(12):1445-53. doi: 10.1038/ng.263. Epub 2008 Nov 16. PMID: 19011630
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